About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35674DYNEIN HEAVY CHAIN
Paelopatides35675MALE FERTILITY FACTOR KL5
Paelopatides35676REVERSE TRANSCRIPTASES
Paelopatides35677PROTEIN EVA-1
Paelopatides35678POL PROTEIN
Paelopatides35679G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides35680-
Paelopatides35681-
Paelopatides35682-
Paelopatides35683MICROSPHERULE PROTEIN 1
Paelopatides35684-
Paelopatides35685VACUOLAR PROTEIN SORTING VPS41
Paelopatides35686PEPTIDOGLYCAN RECOGNITION PROTEIN
Paelopatides35687PLEXIN
Paelopatides35688ATP-DEPENDENT DNA HELICASE
Paelopatides35689-
Paelopatides35690REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides35691-
Paelopatides35692-
Paelopatides35693-
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