About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35715ENDONUCLEASE-RELATED
Paelopatides35716POL PROTEIN
Paelopatides35717CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB
Paelopatides35718-
Paelopatides35719ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35720SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides35721SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides35722GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides35723-
Paelopatides35724-
Paelopatides35725L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides35726CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG
Paelopatides35727-
Paelopatides35728DEDICATOR OF CYTOKINESIS
Paelopatides35729-
Paelopatides35730DEDICATOR OF CYTOKINESIS
Paelopatides35731CENTROMERE PROTEIN K
Paelopatides35732-
Paelopatides35733PROTEIN CBG26694
Paelopatides35734-
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