About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35755ENDONUCLEASE-RELATED
Paelopatides35756-
Paelopatides35757-
Paelopatides35758HISTONE-LYSINE N-METHYLTRANSFERASE ASH1
Paelopatides35759E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER
Paelopatides35760-
Paelopatides35761CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35762FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35763-
Paelopatides35764-
Paelopatides35765-
Paelopatides35766CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATED
Paelopatides35767RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Paelopatides35768RUN AND SH3 DOMAIN CONTAINING
Paelopatides35769UNCHARACTERIZED
Paelopatides35770UNCHARACTERIZED
Paelopatides35771TRANSAMIDASE
Paelopatides35772TRANSAMIDASE
Paelopatides35773SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides35774ENDONUCLEASE-RELATED
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