About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35795FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35796LARVAL STORAGE PROTEIN/PHENOLOXIDASE
Paelopatides35797FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35798LARVAL STORAGE PROTEIN/PHENOLOXIDASE
Paelopatides35799PARTNER OF XRN-2 PROTEIN 1
Paelopatides35800-
Paelopatides35801ANKYRIN REPEAT FAMILY PROTEIN
Paelopatides35802RAGULATOR COMPLEX PROTEIN LAMTOR1
Paelopatides35803-
Paelopatides35804PROTEIN ABHD18
Paelopatides35805PROTEIN ABHD18
Paelopatides35806BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED
Paelopatides35807SAP30
Paelopatides35808-
Paelopatides35809DIMETHYLARGININE DIMETHYLAMINOHYDROLASE
Paelopatides35810DIMETHYLARGININE DIMETHYLAMINOHYDROLASE
Paelopatides35811DIMETHYLARGININE DIMETHYLAMINOHYDROLASE
Paelopatides35812DIMETHYLARGININE DIMETHYLAMINOHYDROLASE
Paelopatides35813COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
Paelopatides35814DIMETHYLARGININE DIMETHYLAMINOHYDROLASE
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