About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35775POL PROTEIN
Paelopatides35776-
Paelopatides35777-
Paelopatides35778ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides35779MULTICOPPER OXIDASE-RELATED
Paelopatides35780-
Paelopatides35781SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Paelopatides35782SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Paelopatides35783TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides35784-
Paelopatides35785-
Paelopatides35786SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides35787ATP-DEPENDENT DNA HELICASE
Paelopatides35788-
Paelopatides35789REVERSE TRANSCRIPTASE
Paelopatides35790SMALL NUCLEAR RIBONUCLEOPROTEIN SM
Paelopatides35791ENDONUCLEASE-RELATED
Paelopatides35792BUCENTAUR RELATED
Paelopatides35793-
Paelopatides35794PROTEIN FAM167A
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