About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35864PROTEIN CBG26694
Paelopatides35865PROTEIN CBG26694
Paelopatides35866ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35867PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 PGC-1 -RELATED
Paelopatides35868-
Paelopatides35869TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides35870ENZYMATIC POLYPROTEIN-RELATED
Paelopatides35871ENDONUCLEASE-RELATED
Paelopatides35872ENDONUCLEASE-RELATED
Paelopatides35873FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35874FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35875SLR1441 PROTEIN
Paelopatides35876FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35877PROTEIN FOLDING REGULATOR
Paelopatides35879PHD FINGER PROTEIN
Paelopatides35880RAN BINDING PROTEIN
Paelopatides35881-
Paelopatides35882-
Paelopatides35883SELECTIN LIGAND RELATED
Paelopatides35884-
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