About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36547-
Paelopatides36548INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6
Paelopatides36549INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6
Paelopatides36550RH14732P
Paelopatides36551-
Paelopatides36552PROTEIN CBG26694
Paelopatides36553PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides36554-
Paelopatides36555CYTOCHROME P450 508A4-RELATED
Paelopatides36556CYTOCHROME P450 508A4-RELATED
Paelopatides36557PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides36558-
Paelopatides36559NXPE FAMILY MEMBER
Paelopatides36560-
Paelopatides36561-
Paelopatides36562REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36563-
Paelopatides36564-
Paelopatides36565-
Paelopatides36566FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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