About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37209POL PROTEIN
Paelopatides37210-
Paelopatides37211GENETIC SUPPRESSOR ELEMENT 1
Paelopatides37212DNA REPLICATION COMPLEX GINS PROTEIN PSF2
Paelopatides37213DREV PROTEIN
Paelopatides3721460S RIBOSOMAL PROTEIN L14
Paelopatides37215D-LACTATE DEHYDROGENASE
Paelopatides37216NUCLEAR HORMONE RECEPTOR
Paelopatides37217GUANINE NUCLEOTIDE EXCHANGE FACTOR
Paelopatides37218DDB1- AND CUL4-ASSOCIATED FACTOR 11
Paelopatides37219EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Paelopatides37220G-PROTEIN COUPLED RECEPTOR
Paelopatides37221EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Paelopatides37222EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides37223CYTOKINE RECEPTOR
Paelopatides37224PROTEIN SIDEKICK
Paelopatides37225ASPARTATE AMINOTRANSFERASE
Paelopatides37226BUCENTAUR RELATED
Paelopatides37227PROTEIN CBG26694
Paelopatides37228MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
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