About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37166ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides37167PROTEIN CBG26694
Paelopatides37168-
Paelopatides37169-
Paelopatides37170-
Paelopatides37171-
Paelopatides37172TRANSMEMBRANE PROTEIN 189
Paelopatides37173TRANSPOSON
Paelopatides37174ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides37175-
Paelopatides37176REVERSE TRANSCRIPTASES
Paelopatides37177-
Paelopatides37178THIOREDOXIN PEROXIDASE
Paelopatides37179-
Paelopatides37180-
Paelopatides37181C2 DOMAIN-CONTAINING PROTEIN 5
Paelopatides37182EXS-RELATED PROTEIN
Paelopatides37183C2 DOMAIN-CONTAINING PROTEIN 5
Paelopatides37184PEPTIDASE
Paelopatides37185VHS DOMAIN CONTAINING PROTEIN FAMILY
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