About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37913SELENOPROTEIN S
Paelopatides37914-
Paelopatides37915-
Paelopatides37916NF-KAPPA-B INHIBITOR ALPHA
Paelopatides37917-
Paelopatides37918-
Paelopatides37919HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides37920-
Paelopatides37921PROTEIN CBG26694
Paelopatides37922-
Paelopatides37923TETRASPANIN
Paelopatides37924TARSH-RELATED FIBRONECTIN DOMAIN-CONTAINING
Paelopatides37925REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides37926ZINC FINGER PROTEIN
Paelopatides37927EXPRESSED PROTEIN
Paelopatides37928-
Paelopatides37929-
Paelopatides37930N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides37931GRANULIN
Paelopatides37932-
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