About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37983POL PROTEIN
Paelopatides37984-
Paelopatides37985SI:CH211-196P9.1-RELATED
Paelopatides37986DEOXYRIBONUCLEASE II
Paelopatides37987ATP-BINDING CASSETTE SUB-FAMILY B
Paelopatides37988ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Paelopatides37989ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides37990-
Paelopatides37991-
Paelopatides37992TUBULIN
Paelopatides37993PROTEIN CBG26694
Paelopatides37994EPM2A-INTERACTING PROTEIN 1
Paelopatides37995FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides37996SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides37997ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Paelopatides37998PROTEIN PHOSPHATASE 2C
Paelopatides37999PROTEIN PHOSPHATASE 2C
Paelopatides38000BONUS, ISOFORM C-RELATED
Paelopatides38001POL PROTEIN
Paelopatides38002ENDONUCLEASE
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