About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38003BONUS, ISOFORM C-RELATED
Paelopatides38004BONUS, ISOFORM C-RELATED
Paelopatides38005-
Paelopatides38006REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38007-
Paelopatides38016-
Paelopatides38017REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38018MUTT/NUDIX HYDROLASE
Paelopatides38019-
Paelopatides38020-
Paelopatides38021RIBONUCLEASE P PROTEIN SUBUNIT P14
Paelopatides38022CYCLIN
Paelopatides38023WD REPEAT-CONTAINING PROTEIN 55
Paelopatides38024-
Paelopatides38025GDP-D-GLUCOSE PHOSPHORYLASE 1
Paelopatides38026BRISC AND BRCA1-A COMPLEX MEMBER 2
Paelopatides38027-
Paelopatides38028REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38029PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides38030CATION-TRANSPORTING ATPASE-RELATED
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