About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39097GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN
Paelopatides39098-
Paelopatides39099NUCLEOLAR COMPLEX 2 AND RAD4-RELATED
Paelopatides39100NUCLEOLAR COMPLEX 2 AND RAD4-RELATED
Paelopatides39101DNAJ HOMOLOG SUBFAMILY C MEMBER 10
Paelopatides39102-
Paelopatides39103-
Paelopatides39104BUCENTAUR RELATED
Paelopatides39105REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39106MUCIN 4-RELATED
Paelopatides39107-
Paelopatides39108PROTEIN CBG26694
Paelopatides39109LUNG SEVEN TRANSMEMBRANE RECEPTOR
Paelopatides39110-
Paelopatides39111-
Paelopatides39112-
Paelopatides39113CYTOCHROME P450 508A4-RELATED
Paelopatides39114-
Paelopatides39115DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
Paelopatides39116GREMLIN 1
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