About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39055-
Paelopatides39056BUCENTAUR RELATED
Paelopatides39057-
Paelopatides39058ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN
Paelopatides39059-
Paelopatides39060ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN
Paelopatides39061-
Paelopatides39062-
Paelopatides39063ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides39064UNCHARACTERIZED
Paelopatides39066PROTEIN CBG26694
Paelopatides39067SULFATE TRANSPORTER
Paelopatides39068SULFATE TRANSPORTER
Paelopatides39069-
Paelopatides39070REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39071ACTIN
Paelopatides39072ACTIN
Paelopatides39073DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT
Paelopatides39074TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides39075-
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