About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39011PROTEIN CBG26694
Paelopatides39012-
Paelopatides39013-
Paelopatides39014KERATIN ASSOCIATED PROTEIN 3-3-RELATED
Paelopatides39015BASIGIN RELATED
Paelopatides39016ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides39017L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides39018PROTEIN SIDEKICK
Paelopatides39019PROTEIN SIDEKICK
Paelopatides3902052 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides39021-
Paelopatides39022REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39023BONUS, ISOFORM C-RELATED
Paelopatides39024-
Paelopatides39025-
Paelopatides39026SULFOTRANSFERASE SULT
Paelopatides39027CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides39028CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides39029IP13529P
Paelopatides39030FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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