About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39137TRANSMEMBRANE PROTEIN 121B
Paelopatides39138REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39139TRANSMEMBRANE PROTEIN 121B
Paelopatides39140-
Paelopatides39141REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39142TORSIN-1A-INTERACTING PROTEIN
Paelopatides39143CASEIN KINASE-RELATED
Paelopatides39144PROTEIN CBG26694
Paelopatides39145-
Paelopatides39146-
Paelopatides39147-
Paelopatides39148-
Paelopatides39149REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39150DUAL SPECIFICITY PROTEIN KINASE
Paelopatides39151-
Paelopatides39152-
Paelopatides39153F-BOX ONLY PROTEIN 4
Paelopatides39154NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2
Paelopatides39155SULFOTRANSFERASE SULT
Paelopatides39156-
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