About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39197TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides39198-
Paelopatides39199IMPORTIN BETA
Paelopatides39200TRANSLATION INITIATION FACTOR IF-2-RELATED
Paelopatides39205POL PROTEIN
Paelopatides39206PARANEOPLASTIC ANTIGEN
Paelopatides39207-
Paelopatides39208PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides39209ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides39210PROTEIN CBG26694
Paelopatides39211-
Paelopatides39212C3ORF6 PROTEIN-RELATED
Paelopatides39213-
Paelopatides39214-
Paelopatides39215-
Paelopatides39216-
Paelopatides39217-
Paelopatides39218-
Paelopatides39219ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides39220ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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