About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39370-
Paelopatides39371-
Paelopatides39372-
Paelopatides39373PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides39374-
Paelopatides39375BAND 7 PROTEIN-RELATED
Paelopatides39377EPM2A-INTERACTING PROTEIN 1
Paelopatides39378EPM2A-INTERACTING PROTEIN 1
Paelopatides39379PROTEIN MCM10 HOMOLOG
Paelopatides39380-
Paelopatides39381CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Paelopatides39382CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Paelopatides39383CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Paelopatides393848-OXOGUANINE DNA GLYCOSYLASE
Paelopatides39385-
Paelopatides39386HAMARTIN
Paelopatides39387AKNA DOMAIN-CONTAINING PROTEIN
Paelopatides39388-
Paelopatides39389I-KAPPA-B-LIKE PROTEIN IKBL
Paelopatides39390FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
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