About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39306LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides39307-
Paelopatides39308SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides39309-
Paelopatides39310-
Paelopatides39311FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides39312STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Paelopatides39313EPM2A-INTERACTING PROTEIN 1
Paelopatides39317-
Paelopatides39318-
Paelopatides39319-
Paelopatides39320-
Paelopatides39321-
Paelopatides39323ATP-DEPENDENT PROTEASE
Paelopatides39324-
Paelopatides39325TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides39326ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN
Paelopatides39327PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides39328-
Paelopatides39329ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN
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