About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39967CATION EFFLUX PROTEIN/ ZINC TRANSPORTER
Paelopatides39968EXPORTIN 4,7-RELATED
Paelopatides39969DNAJ HOMOLOG SUBFAMILY C MEMBER 11
Paelopatides39970DEATH DOMAIN-CONTAINING PROTEIN CRADD
Paelopatides39971-
Paelopatides39972UNCHARACTERIZED
Paelopatides39973UNCHARACTERIZED
Paelopatides39974-
Paelopatides39975AGAP008170-PA
Paelopatides39976-
Paelopatides39978SNF2/RAD54 FAMILY MEMBER
Paelopatides39979ES-2 PROTEIN - RELATED
Paelopatides39980ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1
Paelopatides39981ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 1
Paelopatides39982-
Paelopatides39983MONOACYLGLYCEROL LIPASE
Paelopatides39984-
Paelopatides39985-
Paelopatides39986UNCHARACTERIZED
Paelopatides39987UNCHARACTERIZED
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