About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39988-
Paelopatides39990-
Paelopatides39991SI:CH211-196P9.1-RELATED
Paelopatides39992ADHESION G-PROTEIN COUPLED RECEPTOR
Paelopatides39993PROTEIN EVA-1
Paelopatides39994REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39995LYSYL OXIDASE-LIKE-RELATED
Paelopatides39996ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides39997SI:CH211-108C17.2-RELATED-RELATED
Paelopatides39998SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides39999ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides40000-
Paelopatides40001PLEXIN
Paelopatides40002CGI-121 FAMILY MEMBER
Paelopatides40003ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides40004PROTEIN CBG26694
Paelopatides40005PROTEIN CBG26694
Paelopatides40006ENDONUCLEASE-RELATED
Paelopatides40007ENZYMATIC POLYPROTEIN-RELATED
Paelopatides40008INTRAFLAGELLAR TRANSPORT PROTEIN 25 HOMOLOG
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