About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40009-
Paelopatides40010UNCHARACTERIZED
Paelopatides40011ZINC FINGER PROTEIN AEBP2
Paelopatides40012-
Paelopatides40013PERIAXIN-LIKE
Paelopatides40014-
Paelopatides40015TELOMERE REPEAT-BINDING FACTOR 2-INTERACTING PROTEIN 1
Paelopatides40016MITOCHONDRIA-EATING PROTEIN-RELATED
Paelopatides40017JM1 PROTEIN
Paelopatides40018TIMEOUT/TIMELESS-2
Paelopatides40019FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides40020BILE ACID BETA-GLUCOSIDASE-RELATED
Paelopatides40021ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides40022BILE ACID BETA-GLUCOSIDASE-RELATED
Paelopatides40023PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides40025TESTIS-EXPRESSED PROTEIN 52
Paelopatides40026TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides40027-
Paelopatides4002852 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides40029-
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