About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40050-
Paelopatides40051ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides4005214-3-3 PROTEIN
Paelopatides40053-
Paelopatides40054BREAST CARCINOMA AMPLIFIED SEQUENCE 3
Paelopatides40055PROTEIN CBG26694
Paelopatides40056BREAST CARCINOMA AMPLIFIED SEQUENCE 3
Paelopatides40057SYNAPTOSOMAL ASSOCIATED PROTEIN
Paelopatides40058CHROMOSOME 20 ORF85 FAMILY MEMBER
Paelopatides40059PHOSPHATIDYLINOSITOL TRANSFER PROTEIN
Paelopatides40060-
Paelopatides40061-
Paelopatides40062-
Paelopatides40063-
Paelopatides40064PA-PL1 PHOSPHOLIPASE FAMILY
Paelopatides40065RH59310P
Paelopatides40066-
Paelopatides40067TOLL-LIKE RECEPTOR
Paelopatides40068CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8
Paelopatides40076RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1
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