About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40208HOMEOBOX PROTEIN
Paelopatides40209HOMEOBOX PROTEIN
Paelopatides40210L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides40211HOMEOBOX PROTEIN
Paelopatides40212MUTATED IN BLADDER CANCER 1
Paelopatides40213DUAL SPECIFICITY PROTEIN PHOSPHATASE 19
Paelopatides40214PHD FINGER PROTEINS
Paelopatides40215MUTATED IN BLADDER CANCER 1
Paelopatides40216DUAL SPECIFICITY PROTEIN PHOSPHATASE 19
Paelopatides402172-HYDROXYACYL-COA LYASE
Paelopatides40218PROTEIN CBG26694
Paelopatides40219ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides40220-
Paelopatides402212-HYDROXYACYL-COA LYASE
Paelopatides40222-
Paelopatides40223-
Paelopatides40224-
Paelopatides40225PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides40226AP ENDONUCLEASE
Paelopatides40227-
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