About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40142NECTIN-RELATED
Paelopatides40143DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2
Paelopatides40144EPM2A-INTERACTING PROTEIN 1
Paelopatides40145EPM2A-INTERACTING PROTEIN 1
Paelopatides40146DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2
Paelopatides40147MYOSIN
Paelopatides40148MYOSIN
Paelopatides40149PROTEIN CBG26694
Paelopatides40150PROTEIN CBG26694
Paelopatides40151MYOSIN VII, XV
Paelopatides40152SERINE/THREONINE PROTEIN PHOSPHATASE
Paelopatides40153RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
Paelopatides40154-
Paelopatides40155-
Paelopatides40156-
Paelopatides40157PARANEOPLASTIC ANTIGEN
Paelopatides40158PEPTIDASE S8
Paelopatides40161-
Paelopatides40162-
Paelopatides40163TRANSPOSON TY3-I GAG-POL POLYPROTEIN
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