About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40185BONUS, ISOFORM C-RELATED
Paelopatides40186PROTEIN CBG26694
Paelopatides40187FI04643P-RELATED
Paelopatides40188INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides40189EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
Paelopatides40190PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides40191ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides40192BEN DOMAIN-CONTAINING PROTEIN 5
Paelopatides40193CADHERIN DOMAIN-CONTAINING PROTEIN
Paelopatides40195-
Paelopatides40196FRUCTOSE-1,6-BISPHOSPHATASE-RELATED
Paelopatides40197ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides40198MONOACYLGLYCEROL LIPASE
Paelopatides40199UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Paelopatides40200-
Paelopatides40201PHOSPHATIDYLINOSITOL TRANSFER PROTEIN
Paelopatides40202FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides40203PROTEIN CBG23806
Paelopatides40204-
Paelopatides40205SI:CH211-108C17.2-RELATED-RELATED
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