About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40352CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides40353PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides40354-
Paelopatides40355STROMAL INTERACTION MOLECULE HOMOLOG
Paelopatides40356PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides40357-
Paelopatides40358-
Paelopatides40359PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides40360-
Paelopatides40361-
Paelopatides40362FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides40363CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
Paelopatides40364CYCLINS
Paelopatides40365PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
Paelopatides40366-
Paelopatides40367PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
Paelopatides40368-
Paelopatides40369PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
Paelopatides40370RNA BINDING PROTEIN PUMILIO-RELATED
Paelopatides40371-
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