About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40372CERAMIDASE
Paelopatides40373-
Paelopatides40374CERAMIDASE
Paelopatides40375PROTEIN VAV
Paelopatides40376PROTEIN VAV
Paelopatides40377-
Paelopatides40378AMIDOHYDROLASE
Paelopatides40379EXPRESSED PROTEIN
Paelopatides40380ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides40381-
Paelopatides40382CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides40383-
Paelopatides40384AGAP008810-PA
Paelopatides40385CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR
Paelopatides40386REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides40387-
Paelopatides40388REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides40389-
Paelopatides40390M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25
Paelopatides40391-
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