About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40392HISTONE RNA HAIRPIN-BINDING PROTEIN
Paelopatides40393PALMITOYLTRANSFERASE ZDHHC16
Paelopatides40394TANDEM PH DOMAIN CONTAINING PROTEIN
Paelopatides40395SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
Paelopatides40396SEC15
Paelopatides40397PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
Paelopatides40398PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
Paelopatides40399PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
Paelopatides40400PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
Paelopatides40402ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides40403EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G
Paelopatides40404-
Paelopatides40409SI:CH211-196P9.1-RELATED
Paelopatides40412SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides40413REVERSE TRANSCRIPTASES
Paelopatides40414-
Paelopatides40416PROTEIN, PUTATIVE-RELATED
Paelopatides40417-
Paelopatides40418-
Paelopatides40419ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
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