About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40440AMINO ACID TRANSPORTER
Paelopatides40441AMINO ACID TRANSPORTER
Paelopatides40442DNA HELICASE RECQ FAMILY MEMBER
Paelopatides40443AMINO ACID TRANSPORTER
Paelopatides40444AMINO ACID TRANSPORTER
Paelopatides40445-
Paelopatides40446-
Paelopatides40448-
Paelopatides40449-
Paelopatides40450-
Paelopatides40451INTIMAL THICKNESS RECEPTOR-RELATED
Paelopatides40452OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides40453-
Paelopatides40454PROTEIN CBG26694
Paelopatides40455PROTEIN CBG26694
Paelopatides40456PROTEIN CBG26694
Paelopatides40457CAMK FAMILY PROTEIN KINASE
Paelopatides40458INHIBITOR OF APOPTOSIS
Paelopatides40459-
Paelopatides40460PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
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