About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40461SAM-DEPENDENT METHYLTRANSFERASE
Paelopatides40462ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides40463-
Paelopatides40464-
Paelopatides40466-
Paelopatides40467LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides40468SUPEROXIDE DISMUTASE CU-ZN -RELATED
Paelopatides40469-
Paelopatides40470RNA PROCESSING PROTEIN LD23810P
Paelopatides40471GERANYLGERANYL PYROPHOSPHATE SYNTHASE
Paelopatides40472REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides40473-
Paelopatides40474ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides40475-
Paelopatides40476-
Paelopatides40477GRIP-1 ASSOCIATED PROTEIN 1
Paelopatides40478-
Paelopatides40479-
Paelopatides40480PLEXIN
Paelopatides40481-
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