About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40482PLEXIN
Paelopatides40483PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides40484IP13529P
Paelopatides40485HIGH-AFFINITY CHOLINE TRANSPORTER 1
Paelopatides40486-
Paelopatides40487-
Paelopatides40488-
Paelopatides40489-
Paelopatides40490SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides40491SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides40492-
Paelopatides40493PROTEIN CBG26694
Paelopatides40494MAINTENANCE OF TELOMOERE CAPPING
Paelopatides40495TYROSINE-PROTEIN KINASE
Paelopatides40496-
Paelopatides40497ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides40498FRIZZLED
Paelopatides40499FRIZZLED
Paelopatides40500FRIZZLED
Paelopatides40501ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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