About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41258INHIBITOR OF GROWTH PROTEIN
Paelopatides41259SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides41260-
Paelopatides41261SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides41262-
Paelopatides41263ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides41265CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides41266-
Paelopatides41267-
Paelopatides41268-
Paelopatides4126952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides41270PH DOMAIN-CONTAINING PROTEIN
Paelopatides41271CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides41272SI:CH211-196P9.1-RELATED
Paelopatides41273-
Paelopatides41274STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
Paelopatides41275-
Paelopatides41276NETRIN RECEPTOR UNC5
Paelopatides41277-
Paelopatides41278HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
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