About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41364-
Paelopatides41365TRANSCRIPTION INITIATION FACTOR TFIID
Paelopatides41366-
Paelopatides41367FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
Paelopatides41368PROTEIN CBG26694
Paelopatides41369-
Paelopatides41370-
Paelopatides41371SI:CH211-196P9.1-RELATED
Paelopatides41372IP13529P
Paelopatides41373FUMARATE HYDRATASE-RELATED
Paelopatides41374BUCENTAUR RELATED
Paelopatides41375-
Paelopatides41376BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED
Paelopatides41377NXPE FAMILY MEMBER
Paelopatides41378ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides41379DIAMINE N-ACETYLTRANSFERASE
Paelopatides41380EPM2A-INTERACTING PROTEIN 1
Paelopatides41381AGAP005574-PA
Paelopatides41382NUCLEOPORIN AMO1-LIKE
Paelopatides41383DNA2/NAM7 HELICASE FAMILY
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