About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41405PROTEIN CBG26694
Paelopatides41406SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides41407REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41408SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides41409ENDONUCLEASE-RELATED
Paelopatides41410ENZYMATIC POLYPROTEIN-RELATED
Paelopatides41411-
Paelopatides41412-
Paelopatides41413-
Paelopatides41414-
Paelopatides41415PROTEIN CBG26694
Paelopatides41416PROTEIN CBG26694
Paelopatides41417AVIDIN-RELATED
Paelopatides41418-
Paelopatides41419-
Paelopatides41420AMINO ACID TRANSPORTER
Paelopatides41421PEPTIDASE
Paelopatides41422-
Paelopatides41423MULTI-COPPER OXIDASE
Paelopatides41424PROTEIN CBG26694
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