About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41384SI:CH211-196P9.1-RELATED
Paelopatides41385DNA2/NAM7 HELICASE FAMILY
Paelopatides41386-
Paelopatides41387-
Paelopatides41388-
Paelopatides41389-
Paelopatides41390ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides41391PKSB
Paelopatides41392-
Paelopatides41393-
Paelopatides41394WD40 REPEAT DOMAIN 95
Paelopatides41395WD40 REPEAT PROTEIN
Paelopatides41396REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41397BUCENTAUR RELATED
Paelopatides41399-
Paelopatides41400MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S30/P52 PRO-APOTOTIC PROTEIN
Paelopatides41401MEVALONATE KINASE/GALACTOKINASE
Paelopatides41402-
Paelopatides41403GLYCOSYLATED LYSOSOMAL MEMBRANE PROTEIN
Paelopatides41404RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
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