About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43295IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
Paelopatides43296TYROSINE-PROTEIN KINASE
Paelopatides43297-
Paelopatides43300ADAPTOR PROTEIN, PHOSPHOTYROSINE INTERACTION, PH DOMAIN AND LEUCINE ZIPPER-CONTAINING 2
Paelopatides43301-
Paelopatides43302LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides43303-
Paelopatides43304LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides43305C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides43306LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides43307FI04487P
Paelopatides43308REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43309BUCENTAUR RELATED
Paelopatides43310GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides43312TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides43313ENDONUCLEASE
Paelopatides43314SI:CH211-196P9.1-RELATED
Paelopatides43315CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides43316REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides4331760S RIBOSOMAL PROTEIN L7
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