About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43275-
Paelopatides43276-
Paelopatides43277PROTEIN CBG26694
Paelopatides4327852 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides43279-
Paelopatides43280EPM2A-INTERACTING PROTEIN 1
Paelopatides43281PROTEIN CBG26694
Paelopatides43282REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43283-
Paelopatides43284APPLE DOMAIN-CONTAINING PROTEIN
Paelopatides43285MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides43286CYCLINS
Paelopatides43287SODIUM/HYDROGEN EXCHANGER
Paelopatides43288-
Paelopatides43289-
Paelopatides43290PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
Paelopatides43291PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
Paelopatides43292PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
Paelopatides43293-
Paelopatides43294-
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