About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43940PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides43941PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides43942RETROTRANSPOSON
Paelopatides43943ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides43944MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN
Paelopatides43945FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides43946FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides43947FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides43948TRANSMEMBRANE PROTEIN 144
Paelopatides43949MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN
Paelopatides43950FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides43951-
Paelopatides43952TRANSMEMBRANE PROTEIN 198 FAMILY MEMBER
Paelopatides43953-
Paelopatides43954-
Paelopatides43955-
Paelopatides43956ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides43957-
Paelopatides43958PARANEOPLASTIC ANTIGEN
Paelopatides43959PROTEIN CBG26694
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