About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43860MUCIN 4-RELATED
Paelopatides43861-
Paelopatides43862ASPARTYL-TRNA SYNTHETASE
Paelopatides4386352 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides43864REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43865REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43866EXODEOXYRIBONUCLEASE III
Paelopatides43867LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51
Paelopatides43868ENDONUCLEASE-RELATED
Paelopatides43869POL PROTEIN
Paelopatides43870-
Paelopatides43871G-PROTEIN COUPLED RECEPTOR
Paelopatides43872ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides43873ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides43874PROTEIN CBG26694
Paelopatides43875HISTONE H4
Paelopatides43876HISTONE H3
Paelopatides43877HISTONE H2A
Paelopatides43878-
Paelopatides43879HISTONE H2A
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