About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43819DEDICATOR OF CYTOKINESIS DOCK
Paelopatides43820DEDICATOR OF CYTOKINESIS DOCK
Paelopatides43821HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides43822-
Paelopatides43823NUCLEOTIDE KINASE
Paelopatides43824BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE
Paelopatides43825O-GLCNACASE
Paelopatides43826O-GLCNACASE
Paelopatides43827PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides43828O-GLCNACASE
Paelopatides43829-
Paelopatides43830ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Paelopatides43831-
Paelopatides43832ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides43833TYROSINE-PROTEIN KINASE
Paelopatides43834-
Paelopatides43835EPM2A-INTERACTING PROTEIN 1
Paelopatides43836DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides43837-
Paelopatides43838SI:CH211-108C17.2-RELATED-RELATED
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