About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43900-
Paelopatides43901INNER MEMBRANE TRANSPORTER YGJI-RELATED
Paelopatides43902BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
Paelopatides43903FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides43904MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Paelopatides43905GLYCOPROTEIN HORMONE ALPHA-2
Paelopatides43906YBAK DOMAIN-CONTAINING PROTEIN
Paelopatides43907PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides43908PROTEIN CBG26694
Paelopatides43909-
Paelopatides43910-
Paelopatides43911-
Paelopatides43912POLYCOMB GROUP PROTEIN
Paelopatides43913PROTEIN CBG26694
Paelopatides43914PROTEIN CBG26694
Paelopatides43915-
Paelopatides43916-
Paelopatides43917SI:CH211-108C17.2-RELATED-RELATED
Paelopatides43918ZGC:195170
Paelopatides43919GLYCOPROTEIN HORMONE RECEPTOR
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