About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44069-
Paelopatides44070-
Paelopatides44071-
Paelopatides44072REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44074THYMIDINE KINASE
Paelopatides44075REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44076UNCHARACTERIZED
Paelopatides44077THYMIDINE KINASE
Paelopatides44078POL PROTEIN
Paelopatides44079LSM1
Paelopatides44080SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F
Paelopatides44081PROTEIN CBG26694
Paelopatides44082ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44083IMIDAZOLONEPROPIONASE
Paelopatides44084HEAVYWEIGHT, ISOFORM A
Paelopatides44085-
Paelopatides44086PHOSPHATIDYLINOSITOL KINASE
Paelopatides44087PHOSPHATIDYLINOSITOL KINASE
Paelopatides44088KINESIN-RELATED PROTEIN 6
Paelopatides44089DIADENOSINE 5,5-P1,P4-TETRAPHOSPHATE PYROPHOSPHOHYDROLASE MUTT
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