About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44171HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides44172BTB POZ DOMAIN CONTAINING 12
Paelopatides44173PROTEIN CBG26694
Paelopatides44174PROTEIN CBG26694
Paelopatides44175C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides44176RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides44177ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Paelopatides44178ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Paelopatides44179-
Paelopatides44180-
Paelopatides44181PROTEIN CBG26694
Paelopatides44182PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides44183PROTEIN CBG26694
Paelopatides44184PROTEIN CBG23806
Paelopatides44185-
Paelopatides44186AGAP008170-PA
Paelopatides44187SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides44188-
Paelopatides44189ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides44191REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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