About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44240-
Paelopatides44241-
Paelopatides44242-
Paelopatides44243ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides44244ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides44245PROTEIN CBG26694
Paelopatides44246NXPE FAMILY MEMBER
Paelopatides44247-
Paelopatides44248CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44249CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44250CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44251ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides44252-
Paelopatides44253ACROSIN-RELATED
Paelopatides44254MATRIX METALLOPROTEINASE
Paelopatides44255MATRIX METALLOPROTEINASE
Paelopatides44256MATRIX METALLOPROTEINASE
Paelopatides44260IP13529P
Paelopatides44261-
Paelopatides44262FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED
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