About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44192LEUCINE ZIPPER PROTEIN 4-RELATED
Paelopatides44193DEDICATOR OF CYTOKINESIS DOCK
Paelopatides44194PROTEIN CBG26694
Paelopatides44195PARANEOPLASTIC ANTIGEN
Paelopatides44196-
Paelopatides44197ZINC FINGER PROTEIN 142
Paelopatides44198REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44199REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44200FLAGELLAR RADIAL SPOKE PROTEIN 3
Paelopatides44201REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44202FERREDOXIN/ADRENODOXIN
Paelopatides44205-
Paelopatides44206NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides44207-
Paelopatides44208ATP-DEPENDENT DNA HELICASE
Paelopatides44209ATP-DEPENDENT DNA HELICASE
Paelopatides44210L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides44211-
Paelopatides44212BETA-1,4-GALACTOSYLTRANSFERASE
Paelopatides44213-
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