About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44263PHOSPHOLIPASE D - RELATED
Paelopatides44264PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides44265UNCHARACTERIZED
Paelopatides44266-
Paelopatides44267FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44269PARANEOPLASTIC ANTIGEN
Paelopatides44270-
Paelopatides44271-
Paelopatides44272TMEM26 PROTEIN
Paelopatides44273-
Paelopatides44274ZINC FINGER PROTEIN-LIKE 1
Paelopatides44275METALLOPHOSPHOESTERASE, CALCINEURIN SUPERFAMILY
Paelopatides44276STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 10
Paelopatides44277-
Paelopatides44278G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides44279REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44280-
Paelopatides44281-
Paelopatides44282-
Paelopatides44283-
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