About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44406-
Paelopatides44407ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides44408REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44409SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44410PROTEIN CBG26694
Paelopatides44411MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides44412MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides44413-
Paelopatides44414-
Paelopatides44415ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS
Paelopatides44416PROTEIN CBG26694
Paelopatides44417REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44418UNCHARACTERIZED
Paelopatides44419PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides44420-
Paelopatides44421EG:EG0003.4 PROTEIN-RELATED
Paelopatides44422SYNAPTIC ADHESION-LIKE MOLECULE SALM
Paelopatides44423ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides44424FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44426G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED
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