About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44467BUCENTAUR RELATED
Paelopatides44468REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44469-
Paelopatides44470PROTEIN CBG26694
Paelopatides44471G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides44472-
Paelopatides44473CELL CYCLE CONTROL PROTEIN CWF22-RELATED
Paelopatides44474-
Paelopatides44475-
Paelopatides44476CELL DIVISION CONTROL PROTEIN 6-RELATED
Paelopatides44477CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44478UROCANATE HYDRATASE
Paelopatides44479ENZYMATIC POLYPROTEIN-RELATED
Paelopatides44480-
Paelopatides44481RNA LARIAT DEBRANCHING ENZYME
Paelopatides44483-
Paelopatides44484ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides44485MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Paelopatides44486INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44487CYTOCHROME P450 508A4-RELATED
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