About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44365ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2
Paelopatides44366-
Paelopatides44367ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides44368-
Paelopatides44369-
Paelopatides44370ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides44371ENZYMATIC POLYPROTEIN-RELATED
Paelopatides44372TYROSINE-PROTEIN KINASE
Paelopatides44373-
Paelopatides44374-
Paelopatides44375TYROSINE-PROTEIN KINASE
Paelopatides44376-
Paelopatides44377-
Paelopatides44378INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
Paelopatides44379CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
Paelopatides44380CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
Paelopatides44381CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
Paelopatides44383-
Paelopatides44384HL07962P-RELATED
Paelopatides44385SI:CH211-196P9.1-RELATED
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